C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L29, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086508 Rpl29-ps2-201 ENSMUSG00000094772 10090 + 13:4614180-4614662 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086508
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086508 0.215±0.07 1.456±1.11 0.748±0.48 0.313±0.00 0.157±0.00 1.072±0.06 0.874±1.17 0.118±0.00 0.214±0.09 0.282±0.08 0.091±0.06 1.007±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 344
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 291
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 270
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 316
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 230
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 195
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 344
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 344
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 344
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 2e-39 167
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 283
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 207
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.0000000004 69
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 268
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 344
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 355
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 344
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 200

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