C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700007G11 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080333 1700007G11Rik-201 ENSMUSG00000057816 10090 + 5:98329354-98801910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000080333
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000080333 0.070±0.00 0.227±0.07 0.189±0.02 0.073±0.00 0.398±0.00 0.023±0.01 1.529±0.55 2.401±2.16 0.178±0.07 55.306±48.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VN CIL_0001VN_0003 CGP 5:98254184-98801910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358105 C4orf22-001 protein_coding Homo_sapiens 0 676
ENST00000502497 C4orf22-006 processed_transcript Homo_sapiens 0 331
ENST00000503883 C4orf22-007 processed_transcript Homo_sapiens 0 315
ENST00000508675 C4orf22-003 protein_coding Homo_sapiens 0 331
ENST00000512931 C4orf22-005 processed_transcript Homo_sapiens 0 331
ENST00000513920 C4orf22-002 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000514249 C4orf22-004 nonsense_mediated_decay Homo_sapiens 0 283

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