C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 398
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079881 Zfp398-001 ENSMUSG00000062519 10090 + 6:47835664-47867688 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000079881
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000079881 1.021±0.05 4.726±0.69 0.494±0.00 2.337±1.01 2.508±0.94 0.494±0.08 1.766±0.34 0.801±0.16 1.908±1.55 6.628±2.07 0.568±0.24 1.495±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XN CIL_0004XN_0002 CGP 6:47835661-47908485

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335870 ZNF212-001 protein_coding Homo_sapiens 5.60519e-45 187
ENST00000340622 ZNF746-001 protein_coding Homo_sapiens 7.00649e-45 187
ENST00000378052 ZNF783-004 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000426851 ZNF398-001 protein_coding Homo_sapiens 0 2198
ENST00000434415 ZNF783-001 protein_coding Homo_sapiens 0 243
ENST00000458143 ZNF746-201 protein_coding Homo_sapiens 7.00649e-45 187
ENST00000461958 ZNF746-003 protein_coding Homo_sapiens 8.40779e-45 187
ENST00000462724 ZNF212-002 nonsense_mediated_decay Homo_sapiens 1.4013e-45 187
ENST00000463567 ZNF767P-001 processed_transcript Homo_sapiens 2.99878e-43 182
ENST00000472212 ZNF767P-002 processed_transcript Homo_sapiens 4.2039e-45 187
ENST00000475153 ZNF398-003 protein_coding Homo_sapiens 0 2237
ENST00000476295 ZNF783-002 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000481584 ZNF212-005 protein_coding Homo_sapiens 1e-19 100
ENST00000483892 ZNF398-005 protein_coding Homo_sapiens 0 2028
ENST00000485111 ZNF398-006 processed_transcript Homo_sapiens 0 652
ENST00000486492 ZNF767P-003 processed_transcript Homo_sapiens 2.8026e-45 187
ENST00000491174 ZNF398-004 protein_coding Homo_sapiens 0 2159
ENST00000493198 ZNF767P-005 retained_intron Homo_sapiens 0.0000000000001 81
ENST00000513792 ZNF767P-006 transcribed_unprocessed_pseudogene Homo_sapiens 1.4013e-45 187

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