C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanylate cyclase 2c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078095 Gucy2c-002 ENSMUSG00000042638 10090 - 6:136697285-136781742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078095
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078095 0.029±0.01 0.020±0.00 0.033±0.01 6.681±0.00 0.007±0.00 0.012±0.00 0.116±0.02 0.052±0.04 0.013±0.00 0.046±0.03 0.254±0.00 0.096±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096F CIL_00096F_0002 VISTA 6:136167244-136769677
CIL_00082T CIL_00082T_0002 VISTA 6:136168119-136771874
CIL_0003HC CIL_0003HC_0002 CGP 6:136612070-136781765

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004383 IMP guanylate cyclase activity
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006182 IDA cGMP biosynthetic process
GO:0006468 IEA protein phosphorylation
GO:0009636 IMP response to toxic substance
GO:0016021 IEA integral component of membrane
GO:0035556 IEA intracellular signal transduction
GO:0042127 IGI regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000078438 GUCY2C (2 of 2)-201 protein_coding Danio_rerio 0 327
ENSDART00000153225 GUCY2C (2 of 2)-001 protein_coding Danio_rerio 0 327
ENSDART00000041298 npr1a-201 protein_coding Danio_rerio 0.000000000000007 88
ENSDART00000136244 npr1a-001 protein_coding Danio_rerio 0.000000000000007 88
ENST00000254854 GUCY2D-001 protein_coding Homo_sapiens 5e-31 141
ENST00000261170 GUCY2C-001 protein_coding Homo_sapiens 0 1640

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