C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6344
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075962 Gm6344-001 ENSMUSG00000094446 10090 + 13:55085777-55086259 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000075962
Transcript ID Liver
ENSMUST00000075962 27.159±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0001A8 CIL_0001A8_0002 CGP 13:55005985-55100300
CIL_0000OX CIL_0000OX_0004 CGP 13:55027880-55134825

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111140 RPL29-201 protein_coding Danio_rerio 0 200
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 381
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 320
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 307
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 309
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 211
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 296
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 381
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 381
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 381
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 224
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.0000000004 69
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 287
ENST00000488409 RPL29P2-001 transcribed_processed_pseudogene Homo_sapiens 0 281
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 381
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 370
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 381
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 217
ENST00000498671 RPL29P2-002 processed_transcript Homo_sapiens 0 281

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