C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ezrin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064234 Ezr-001 ENSMUSG00000052397 10090 - 17:6738041-6782784 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064234 11.908±8.51 3.039±0.56 52.124±2.24 15.699±2.47 24.104±7.77 137.360±18.57 12.133±2.42 84.036±4.82 12.663±12.38 56.447±3.20 0.849±0.77 44.652±6.14 119.831±27.05 2.902±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W4 CIL_0004W4_0002 CGP 17:6648941-6738042
CIL_0004W5 CIL_0004W5_0002 CGP 17:6673458-6782784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0001931 IDA uropod
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005622 IDA intracellular
GO:0005730 IEA nucleolus
GO:0005829 IEA cytosol
GO:0005884 ISS actin filament
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0005925 IEA focal adhesion
GO:0007159 IEA leukocyte cell-cell adhesion
GO:0008360 IEA regulation of cell shape
GO:0010628 IEA positive regulation of gene expression
GO:0015629 ISS actin cytoskeleton
GO:0016020 IEA membrane
GO:0016323 ISS basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0019898 ISS extrinsic component of membrane
GO:0019904 IEA protein domain specific binding
GO:0022614 IEA membrane to membrane docking
GO:0030175 IEA filopodium
GO:0030315 IEA T-tubule
GO:0030855 IEA epithelial cell differentiation
GO:0031528 IEA microvillus membrane
GO:0031623 IMP receptor internalization
GO:0031982 IEA vesicle
GO:0032403 IEA protein complex binding
GO:0035088 IMP establishment or maintenance of apical/basal cell polarity
GO:0036064 IDA ciliary basal body
GO:0044297 IEA cell body
GO:0044393 IEA microspike
GO:0044822 IEA poly(A) RNA binding
GO:0045121 IEA membrane raft
GO:0045177 IDA apical part of cell
GO:0046847 IEA filopodium assembly
GO:0050839 ISS cell adhesion molecule binding
GO:0051015 ISS actin filament binding
GO:0051017 ISS actin filament bundle assembly
GO:0051286 IEA cell tip
GO:0061028 IEA establishment of endothelial barrier
GO:0070062 IEA extracellular vesicular exosome
GO:0097449 IEA astrocyte projection
GO:0097454 IEA Schwann cell microvillus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000016214 msna-001 protein_coding Danio_rerio 0 501
ENST00000337147 EZR-002 protein_coding Homo_sapiens 0 2169
ENST00000367075 EZR-001 protein_coding Homo_sapiens 0 2169
ENST00000392177 EZR-201 protein_coding Homo_sapiens 0 2165
ENST00000476189 EZR-003 processed_transcript Homo_sapiens 0 726

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