C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proprotein convertase subtilisin/kexin type 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055576 Pcsk6-001 ENSMUSG00000030513 10090 + 7:65862029-66050335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055576
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055576 9.980±5.24 0.727±0.00 1.384±1.54 4.059±2.46 5.530±1.30 4.709±1.48 2.344±1.59 0.663±0.07 0.518±0.01 2.680±0.82 6.534±5.13 0.345±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CP CIL_0007CP_0002 CGP 7:65861734-66074582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IEA endopeptidase activity
GO:0004252 IBA serine-type endopeptidase activity
GO:0005615 IBA extracellular space
GO:0005794 IBA Golgi apparatus
GO:0006508 IEA proteolysis
GO:0007354 IGI zygotic determination of anterior/posterior axis, embryo
GO:0007368 IGI determination of left/right symmetry
GO:0008201 IEA heparin binding
GO:0009100 IEA glycoprotein metabolic process
GO:0009986 IEA cell surface
GO:0016485 IBA protein processing
GO:0016486 IEA peptide hormone processing
GO:0031012 IEA extracellular matrix
GO:0032902 IEA nerve growth factor production
GO:0032940 IEA secretion by cell
GO:0048406 IEA nerve growth factor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331826 PCSK6-201 protein_coding Homo_sapiens 0 2082
ENST00000376752 PCSK5-001 protein_coding Homo_sapiens 0 462
ENST00000376767 PCSK5-003 protein_coding Homo_sapiens 0 462
ENST00000398185 PCSK6-008 protein_coding Homo_sapiens 0 1951
ENST00000545128 PCSK5-201 protein_coding Homo_sapiens 0 462
ENST00000557794 PCSK6-009 processed_transcript Homo_sapiens 0 350
ENST00000558154 PCSK6-007 retained_intron Homo_sapiens 0 484
ENST00000558433 PCSK6-015 processed_transcript Homo_sapiens 0 466
ENST00000558864 PCSK6-011 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000559417 PCSK6-010 protein_coding Homo_sapiens 0 850
ENST00000559430 PCSK6-013 processed_transcript Homo_sapiens 0 287
ENST00000559499 PCSK6-006 retained_intron Homo_sapiens 0 669
ENST00000611716 PCSK6-001 protein_coding Homo_sapiens 0 3655
ENST00000611967 PCSK6-002 protein_coding Homo_sapiens 0 1967
ENST00000615296 PCSK6-019 protein_coding Homo_sapiens 0 1969
ENST00000618548 PCSK6-005 protein_coding Homo_sapiens 0 2183
ENST00000619160 PCSK6-004 protein_coding Homo_sapiens 0 2183
ENST00000621185 PCSK6-016 protein_coding Homo_sapiens 0 335
ENST00000622483 PCSK6-003 protein_coding Homo_sapiens 0 2944

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