C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110037F02 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055372 1110037F02Rik-002 ENSMUSG00000040720 10090 + 4:11485958-11527621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonMuscleOvaryTestisENSMUST00000055372
Transcript ID Adipose Adrenal Brain Colon Muscle Ovary Testis
ENSMUST00000055372 1.852±0.00 1.602±0.27 2.123±0.24 0.905±0.06 0.489±0.13 1.758±0.26 2.866±2.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BS CIL_0002BS_0002 CGP 4:11331933-11550684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297591 KIAA1429-001 protein_coding Homo_sapiens 0 4342
ENST00000421249 KIAA1429-002 protein_coding Homo_sapiens 0 4525
ENST00000519001 KIAA1429-009 processed_transcript Homo_sapiens 0 318
ENST00000521080 KIAA1429-005 retained_intron Homo_sapiens 0 905
ENST00000522263 KIAA1429-004 nonsense_mediated_decay Homo_sapiens 0 1851
ENST00000523405 KIAA1429-006 processed_transcript Homo_sapiens 0 527

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