C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052366 Pcdhb1-201 ENSMUSG00000051663 10090 + 18:37264998-37267454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungOvaryTestisENSMUST00000052366
Transcript ID Brain Kidney Lung Ovary Testis
ENSMUST00000052366 0.023±0.02 0.023±0.01 0.020±0.00 0.072±0.03 0.312±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062S CIL_00062S_000Y CGP 18:37264998-37297613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306549 PCDHB1-001 protein_coding Homo_sapiens 0 2523

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