C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047239 Pcnxl2-002 ENSMUSG00000060212 10090 - 8:125751508-125898317 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverENSMUST00000047239
Transcript ID Adrenal Brain Colon Heart Kidney Liver
ENSMUST00000047239 0.044±0.00 5.370±3.05 0.081±0.03 0.018±0.00 0.024±0.01 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086G CIL_00086G_0002 VISTA 8:125257735-125859984
CIL_0001OO CIL_0001OO_0002 CGP 8:125729963-125898317
CIL_0006KA CIL_0006KA_0002 CGP 8:125751508-125947439

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258229 PCNXL2-002 protein_coding Homo_sapiens 0 4087
ENST00000324142 PCNXL2-003 retained_intron Homo_sapiens 0 706
ENST00000344698 PCNXL2-001 protein_coding Homo_sapiens 0 2030
ENST00000355703 PCNXL3-001 protein_coding Homo_sapiens 0 411
ENST00000430153 PCNXL2-201 protein_coding Homo_sapiens 0 1151
ENST00000439247 PCNXL3-003 retained_intron Homo_sapiens 0 411
ENST00000462233 PCNXL2-007 nonsense_mediated_decay Homo_sapiens 0 1552
ENST00000462762 PCNXL2-016 processed_transcript Homo_sapiens 5e-27 124
ENST00000475463 PCNXL2-005 nonsense_mediated_decay Homo_sapiens 0 1151
ENST00000484347 PCNXL2-011 protein_coding Homo_sapiens 0 407
ENST00000486012 PCNXL2-012 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000488780 PCNXL2-010 protein_coding Homo_sapiens 0 1125
ENST00000490102 PCNXL2-022 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000496675 PCNXL2-015 processed_transcript Homo_sapiens 2e-27 126
ENST00000506013 RP5-862P8.3-001 unprocessed_pseudogene Homo_sapiens 0 219
ENST00000517808 PCNXL2-018 nonsense_mediated_decay Homo_sapiens 2e-24 115
ENST00000518351 PCNXL2-019 protein_coding Homo_sapiens 6e-28 128
ENST00000519530 PCNXL2-017 retained_intron Homo_sapiens 0 204
ENST00000520463 PCNXL2-021 processed_transcript Homo_sapiens 0 374

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