C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane 6 superfamily member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041890 Tm6sf1-001 ENSMUSG00000038623 10090 + 7:81859001-81884071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryENSMUST00000041890
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary
ENSMUST00000041890 5.392±0.00 4.808±0.40 9.288±3.09 1.905±0.27 2.009±0.00 2.026±0.65 9.289±2.37 7.973±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L6 CIL_0001L6_0002 CGP 7:81859001-81934473

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258909 TM6SF1-004 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000299633 HDGFRP3-001 protein_coding Homo_sapiens 0 263
ENST00000322019 TM6SF1-001 protein_coding Homo_sapiens 0 1482
ENST00000379384 TM6SF1-003 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000379390 TM6SF1-006 protein_coding Homo_sapiens 0 667
ENST00000564988 TM6SF1-008 processed_transcript Homo_sapiens 0 394
ENST00000565774 TM6SF1-005 protein_coding Homo_sapiens 0 907
ENST00000565982 TM6SF1-009 protein_coding Homo_sapiens 0 857

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