C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NIMA (never in mitosis gene a)-related expressed kinase 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040992 Nek9-001 ENSMUSG00000034290 10090 - 12:85299514-85339362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040992
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040992 24.158±2.56 18.658±6.47 27.888±1.56 10.731±2.65 17.697±0.66 14.182±1.22 23.831±1.40 15.005±0.34 8.176±1.26 22.740±4.09 44.536±2.27 21.448±3.47 13.547±3.70 10.610±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084S CIL_00084S_0002 VISTA 12:85135374-85736988
CIL_00085H CIL_00085H_0002 VISTA 12:85154385-85756659
CIL_0007PT CIL_0007PT_0002 VISTA 12:85154400-85756289
CIL_0003G4 CIL_0003G4_0002 CGP 12:85288591-85339362
CIL_0003G5 CIL_0003G5_0002 CGP 12:85299514-85374717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007067 IEA mitotic nuclear division
GO:0019901 ISS protein kinase binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238616 NEK9-001 protein_coding Homo_sapiens 0 4239
ENST00000553823 NEK9-005 protein_coding Homo_sapiens 0 516
ENST00000553945 NEK9-011 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000554258 NEK9-007 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000555405 NEK9-004 retained_intron Homo_sapiens 0 1179
ENST00000555537 NEK9-009 retained_intron Homo_sapiens 0 348
ENST00000555763 NEK9-010 processed_transcript Homo_sapiens 0 640
ENST00000555961 NEK9-008 retained_intron Homo_sapiens 0 220
ENST00000556170 NEK9-002 retained_intron Homo_sapiens 0 2119
ENST00000557026 NEK9-003 retained_intron Homo_sapiens 0 2124
ENST00000557673 NEK9-006 protein_coding Homo_sapiens 0 752

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