C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040089 Rnf43-002 ENSMUSG00000034177 10090 + 11:87699897-87735539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMusclePlacentaTestisENSMUST00000040089
Transcript ID Adipose Breast Heart Liver Muscle Placenta Testis
ENSMUST00000040089 0.018±0.01 0.475±0.05 0.045±0.02 1.138±0.00 0.143±0.06 0.234±0.17 0.253±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005887 ISS integral component of plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030178 ISS negative regulation of Wnt signaling pathway
GO:0038018 ISS Wnt receptor catabolic process
GO:0042787 ISS protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0072089 IMP stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000407977 RNF43-003 protein_coding Homo_sapiens 0 1977
ENST00000577625 RNF43-006 protein_coding Homo_sapiens 0 1899
ENST00000577716 RNF43-001 protein_coding Homo_sapiens 0 1977
ENST00000581868 RNF43-004 protein_coding Homo_sapiens 0 1857
ENST00000583753 RNF43-005 protein_coding Homo_sapiens 0 1810
ENST00000584437 RNF43-002 protein_coding Homo_sapiens 0 1977

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