C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033744 Atp2b3-003 ENSMUSG00000031376 10090 + X:73503086-73558214 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033744
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033744 0.021±0.01 9.528±3.11 0.346±0.06 0.182±0.02 0.019±0.00 0.063±0.01 0.011±0.00 0.018±0.00 0.818±0.11 0.787±0.19 0.060±0.01 0.487±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0002 CGP X:73483602-73571005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000090252 atp2b3a-202 protein_coding Danio_rerio 0 1759
ENSDART00000093117 atp2b3a-002 protein_coding Danio_rerio 0 1759
ENSDART00000135811 atp2b3a-001 protein_coding Danio_rerio 0 1759
ENSDART00000014257 atp2b1a-201 protein_coding Danio_rerio 0 1234
ENSDART00000128079 atp2b1a-202 protein_coding Danio_rerio 0 1053
ENSDART00000077664 atp2b1a-001 protein_coding Danio_rerio 0 1053
ENSDART00000104353 atp2b1b-001 protein_coding Danio_rerio 0 998
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 4189
ENST00000341360 ATP2B4-002 protein_coding Homo_sapiens 0 1450
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 4381
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1718
ENST00000357681 ATP2B4-001 protein_coding Homo_sapiens 0 1450
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 4189
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1718
ENST00000367218 ATP2B4-201 protein_coding Homo_sapiens 0 1450
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 2983
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1718
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 2983
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1718
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 2100
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1718
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 425

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