C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRA1 domain family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033489 Praf2-001 ENSMUSG00000031149 10090 + X:7728439-7731064 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033489 22.720±11.47 25.089±5.74 14.969±0.46 35.230±5.06 23.968±7.09 31.172±7.02 6.089±0.78 15.632±2.14 4.546±1.42 21.432±3.08 1.703±0.58 35.462±12.27 19.389±4.82 0.992±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005768 IEA endosome
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376358 AF196779.12-001 protein_coding Homo_sapiens 0 381
ENST00000376386 PRAF2-002 protein_coding Homo_sapiens 0 442
ENST00000553851 PRAF2-001 protein_coding Homo_sapiens 0 652
ENST00000618882 PRAF2-003 processed_transcript Homo_sapiens 9.94922e-44 180

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