C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamyl-tRNA synthetase 2 (mitochondrial)(putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033159 Ears2-001 ENSMUSG00000030871 10090 - 7:122038821-122067263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000033159
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000033159 7.444±1.35 17.504±1.88 7.141±1.34 7.328±0.94 6.191±0.43 5.383±0.38 5.211±0.64 6.775±0.96 3.767±0.63 14.073±3.74 3.586±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D4 CIL_0006D4_0002 CGP 7:121986722-122067263
CIL_0006D3 CIL_0006D3_0002 CGP 7:122037213-122082194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0004818 IEA glutamate-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0050561 IEA glutamate-tRNA(Gln) ligase activity
GO:0070127 IEA tRNA aminoacylation for mitochondrial protein translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000449606 EARS2-201 protein_coding Homo_sapiens 0 1629
ENST00000562402 EARS2-012 retained_intron Homo_sapiens 0 566
ENST00000562581 EARS2-007 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000563232 EARS2-003 protein_coding Homo_sapiens 0 1495
ENST00000563459 EARS2-001 protein_coding Homo_sapiens 0 1622
ENST00000564461 EARS2-010 processed_transcript Homo_sapiens 0 357
ENST00000564501 EARS2-017 protein_coding Homo_sapiens 0 1520
ENST00000564668 EARS2-009 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000564987 EARS2-006 processed_transcript Homo_sapiens 0 1140
ENST00000564997 EARS2-015 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000565344 EARS2-008 retained_intron Homo_sapiens 0 521

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