C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xylosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032892 Xylt1-001 ENSMUSG00000030657 10090 + 7:117380979-117667751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000032892
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000032892 0.474±0.07 1.835±0.46 2.224±1.15 2.577±1.15 0.456±0.12 1.721±0.79 0.054±0.02 1.096±0.42 0.693±0.22 2.615±0.73 0.488±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RL CIL_0008RL_0002 VISTA 7:116942693-117544007
CIL_0003QM CIL_0003QM_0002 CGP 7:117380979-118116186

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0006024 IEA glycosaminoglycan biosynthetic process
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016020 IEA membrane
GO:0030158 IEA protein xylosyltransferase activity
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000017003 XYLT2-001 protein_coding Homo_sapiens 0 590
ENST00000261381 XYLT1-001 protein_coding Homo_sapiens 0 3234
ENST00000376550 XYLT2-003 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000507602 XYLT2-002 protein_coding Homo_sapiens 0 590
ENST00000575674 XYLT1-004 retained_intron Homo_sapiens 0 551

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