C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin-like enhancer of split 1, homolog of Drosophila E(spl)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030095 Tle1-008 ENSMUSG00000008305 10090 - 4:72118205-72200152 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030095
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030095 6.501±0.76 3.541±0.25 2.968±0.83 3.967±0.41 0.865±0.26 1.883±0.45 4.603±1.86 4.582±1.28 0.953±0.17 7.901±1.58 1.549±0.34 1.531±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KE CIL_0007KE_0004 UCNEbase 4:70810873-73489292
CIL_00090V CIL_00090V_0002 VISTA 4:71539683-72141070
CIL_0008X3 CIL_0008X3_0002 VISTA 4:71768926-72369840
CIL_0009AO CIL_0009AO_0002 VISTA 4:71866327-72468960
CIL_0008C4 CIL_0008C4_0002 VISTA 4:71896487-72497365
CIL_0008TV CIL_0008TV_0002 VISTA 4:72081989-72683115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003682 IDA chromatin binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IGI regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000100020 gro1-201 protein_coding Danio_rerio 0 302
ENSDART00000130553 gro1-001 protein_coding Danio_rerio 0 302
ENSDART00000144345 gro1-002 retained_intron Danio_rerio 1e-20 106
ENST00000262953 TLE2-004 protein_coding Homo_sapiens 0 641
ENST00000265284 TLE4-018 protein_coding Homo_sapiens 0 1290
ENST00000376463 TLE1-005 protein_coding Homo_sapiens 0 477
ENST00000376472 TLE1-201 protein_coding Homo_sapiens 0 2374
ENST00000376499 TLE1-001 protein_coding Homo_sapiens 0 2427
ENST00000376537 TLE4-015 protein_coding Homo_sapiens 0 1290
ENST00000376544 TLE4-201 protein_coding Homo_sapiens 0 1290
ENST00000376552 TLE4-008 protein_coding Homo_sapiens 0 1290
ENST00000418319 TLE1-002 protein_coding Homo_sapiens 0 1219
ENST00000422965 TLE1P1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000426948 TLE2-201 protein_coding Homo_sapiens 0 525
ENST00000443826 TLE2-002 protein_coding Homo_sapiens 0 641
ENST00000455444 TLE2-202 protein_coding Homo_sapiens 0 641
ENST00000462803 TLE4-016 nonsense_mediated_decay Homo_sapiens 0 1290
ENST00000464999 TLE1-003 processed_transcript Homo_sapiens 0 281
ENST00000470872 TLE4-014 nonsense_mediated_decay Homo_sapiens 0 1290
ENST00000478290 TLE4-005 processed_transcript Homo_sapiens 0 451
ENST00000491534 TLE1-006 processed_transcript Homo_sapiens 0 496
ENST00000496114 TLE4-030 protein_coding Homo_sapiens 0 289
ENST00000590536 TLE2-006 protein_coding Homo_sapiens 0 638
ENST00000591529 TLE2-001 protein_coding Homo_sapiens 0 525

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