C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ephrin A4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029674 Efna4-001 ENSMUSG00000028040 10090 - 3:89333390-89338028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverOvaryENSMUST00000029674
Transcript ID Adipose Brain Liver Ovary
ENSMUST00000029674 20.974±0.00 9.549±1.64 1.259±0.15 7.521±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IBA plasma membrane
GO:0007411 IBA axon guidance
GO:0030316 IBA osteoclast differentiation
GO:0031225 IEA anchored component of membrane
GO:0046849 IBA bone remodeling
GO:0046875 IBA ephrin receptor binding
GO:0048013 IBA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225388 NUFIP2-001 protein_coding Homo_sapiens 0.00000009 66
ENST00000233190 NDUFS1-001 protein_coding Homo_sapiens 0.000001 62
ENST00000261326 MOCOS-001 protein_coding Homo_sapiens 0.000009 58
ENST00000261520 ICE2-001 protein_coding Homo_sapiens 0.00001 58
ENST00000284202 IMPACT-001 protein_coding Homo_sapiens 0.0002 53
ENST00000295830 RPL22L1-001 protein_coding Homo_sapiens 0.000003 58
ENST00000306984 MPLKIP-001 protein_coding Homo_sapiens 0.00001 58
ENST00000345664 CENPL-003 protein_coding Homo_sapiens 0.000000004 68
ENST00000355484 FADS2-014 protein_coding Homo_sapiens 0.000003 58
ENST00000356198 CENPL-001 protein_coding Homo_sapiens 0.000000005 68
ENST00000359751 EFNA4-002 protein_coding Homo_sapiens 0 560
ENST00000367710 CENPL-002 protein_coding Homo_sapiens 0.000000004 68
ENST00000368409 EFNA4-001 protein_coding Homo_sapiens 0 813
ENST00000379170 MCUR1-001 protein_coding Homo_sapiens 0.000002 60
ENST00000427683 EFNA4-003 protein_coding Homo_sapiens 0 540
ENST00000454147 SLC6A11-002 protein_coding Homo_sapiens 0.0000003 62
ENST00000478578 RPL22L1-008 retained_intron Homo_sapiens 0.000001 58
ENST00000479945 PDHB-003 retained_intron Homo_sapiens 0.000006 58
ENST00000505139 EFNA3-001 protein_coding Homo_sapiens 0 207
ENST00000528017 ZNF7-006 retained_intron Homo_sapiens 0.000008 58
ENST00000558090 HOMER2-005 protein_coding Homo_sapiens 0.000004 60
ENST00000558121 ICE2-007 retained_intron Homo_sapiens 0.000005 58
ENST00000558181 ICE2-002 nonsense_mediated_decay Homo_sapiens 0.00001 58
ENST00000562801 GPT2-006 retained_intron Homo_sapiens 0.0000008 60
ENST00000564072 SLCO3A1-014 retained_intron Homo_sapiens 0.00000002 66
ENST00000568900 SPNS1-004 retained_intron Homo_sapiens 0.00004 55
ENST00000586526 CLLU1-005 retained_intron Homo_sapiens 0.00001 57
ENST00000597852 CD37-003 retained_intron Homo_sapiens 0.0002 53
ENST00000617208 PHLDB1-014 processed_transcript Homo_sapiens 0.0000007 58

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