C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: degenerative spermatocyte homolog 2 (Drosophila), lipid desaturase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021691 Degs2-201 ENSMUSG00000021263 10090 - 12:108690222-108702306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyPlacentaENSMUST00000021691
Transcript ID Bladder Colon Kidney Placenta
ENSMUST00000021691 26.573±5.15 149.924±11.57 9.208±1.17 6.696±5.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HN CIL_0003HN_0002 CGP 12:108370957-108688513
CIL_0003HO CIL_0003HO_0002 CGP 12:108554720-108702306
CIL_00032R CIL_00032R_0002 CGP 12:108686792-108816632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000170 IDA sphingosine hydroxylase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006667 IGI sphinganine metabolic process
GO:0016021 IEA integral component of membrane
GO:0030148 IGI sphingolipid biosynthetic process
GO:0042284 IGI sphingolipid delta-4 desaturase activity
GO:0046513 IDA ceramide biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305631 DEGS2-001 protein_coding Homo_sapiens 0 880
ENST00000553834 DEGS2-002 protein_coding Homo_sapiens 3e-29 132
ENST00000557117 DEGS2-003 processed_transcript Homo_sapiens 0 625

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