C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 2B, subunit 2 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004910 Eif2b2-001 ENSMUSG00000004788 10090 + 12:85219481-85226628 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004910
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004910 20.969±2.71 15.197±5.00 24.278±4.15 22.351±12.95 11.138±5.19 17.110±3.34 12.536±3.23 21.236±1.04 19.198±11.84 17.198±2.24 20.442±3.20 15.323±6.23 14.832±9.29 10.870±5.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084S CIL_00084S_0002 VISTA 12:85135374-85736988
CIL_00085H CIL_00085H_0002 VISTA 12:85154385-85756659
CIL_0007PT CIL_0007PT_0002 VISTA 12:85154400-85756289
CIL_0003G0 CIL_0003G0_0002 CGP 12:85166639-85226628
CIL_0005OJ CIL_0005OJ_0002 CGP 12:85219481-85270591

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 ISS ovarian follicle development
GO:0003743 ISS translation initiation factor activity
GO:0005085 IBA guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005524 ISS ATP binding
GO:0005525 ISS GTP binding
GO:0005737 ISS cytoplasm
GO:0005851 ISS eukaryotic translation initiation factor 2B complex
GO:0006413 ISS translational initiation
GO:0006446 IBA regulation of translational initiation
GO:0007417 ISS central nervous system development
GO:0014003 ISS oligodendrocyte development
GO:0042552 ISS myelination
GO:0043547 ISS positive regulation of GTPase activity
GO:0051716 ISS cellular response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266126 EIF2B2-001 protein_coding Homo_sapiens 0 1317
ENST00000553401 EIF2B2-005 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000553539 EIF2B2-003 retained_intron Homo_sapiens 0 407
ENST00000554748 EIF2B2-006 protein_coding Homo_sapiens 0 222
ENST00000555522 EIF2B2-002 retained_intron Homo_sapiens 0 767
ENST00000556028 EIF2B2-004 nonsense_mediated_decay Homo_sapiens 0 765
ENST00000556668 EIF2B2-007 retained_intron Homo_sapiens 0 425

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