C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 4, subfamily f, polypeptide 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003413 Cyp4f39-201 ENSMUSG00000061126 10090 + 17:32468462-32492479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000003413
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000003413 0.116±0.09 0.034±0.00 0.324±0.18 0.125±0.05 0.107±0.03 0.187±0.05 0.185±0.12 1.125±0.02 0.321±0.16 0.774±0.23 0.121±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MH CIL_0001MH_0002 CGP 17:32413100-32492479
CIL_00019Y CIL_00019Y_0002 CGP 17:32468462-32528894

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324632 CYP4F12-006 protein_coding Homo_sapiens 0 316
ENST00000430608 CYP4F12-002 retained_intron Homo_sapiens 0.00000004 64
ENST00000441682 CYP4F8-005 retained_intron Homo_sapiens 0 230
ENST00000451750 CYP4F12-003 retained_intron Homo_sapiens 2e-20 104
ENST00000550308 CYP4F12-001 protein_coding Homo_sapiens 0 316
ENST00000587680 CYP4F8-009 retained_intron Homo_sapiens 0.0000000005 69
ENST00000612078 CYP4F8-004 protein_coding Homo_sapiens 0 331
ENST00000617645 CYP4F8-007 protein_coding Homo_sapiens 3e-27 126

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