C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127875 bmp1a-201 ENSDARG00000028071 7955 - 8:53434078-53571387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000127875
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000127875 5.221±4.04 5.608±1.90 5.529±0.00 32.036±0.00 3.998±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IMP ossification
GO:0004222 IEA metalloendopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0009953 IMP dorsal/ventral pattern formation
GO:0016787 IEA hydrolase activity
GO:0033333 IMP fin development
GO:0046872 IEA metal ion binding
GO:0048264 IMP determination of ventral identity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025986 Tll2-201 protein_coding Mus_musculus 0 1120
ENSMUST00000169941 Tll2-202 protein_coding Mus_musculus 0 353
ENST00000306349 BMP1-010 protein_coding Homo_sapiens 0 1075
ENST00000306385 BMP1-001 protein_coding Homo_sapiens 0 1506
ENST00000354870 BMP1-201 protein_coding Homo_sapiens 0 1284
ENST00000471755 BMP1-003 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000483364 BMP1-002 nonsense_mediated_decay Homo_sapiens 0 854
ENST00000518913 BMP1-015 nonsense_mediated_decay Homo_sapiens 0 953
ENST00000520626 BMP1-006 nonsense_mediated_decay Homo_sapiens 0 953
ENST00000520970 BMP1-009 nonsense_mediated_decay Homo_sapiens 0 1075
ENST00000520982 BMP1-005 nonsense_mediated_decay Homo_sapiens 0 1384
ENST00000521385 BMP1-007 nonsense_mediated_decay Homo_sapiens 0 1072

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