C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein H3 (2H9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113082 HNRNPH3-001 ENSDARG00000039466 7955 + 13:23003728-23012160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000113082
Transcript ID Brain Heart Liver Muscle
ENSDART00000113082 1.557±0.00 3.486±0.00 0.595±0.00 1.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H3 CIL_0000H3_0001 CGP 13:22980164-23012629
CIL_0000PX CIL_0000PX_0001 CGP 13:23003728-23047472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020263 Hnrnph3-001 protein_coding Mus_musculus 0 274
ENSMUST00000069304 Hnrnph1-201 protein_coding Mus_musculus 0 257
ENSMUST00000077817 Hnrnph1-006 protein_coding Mus_musculus 0 257
ENSMUST00000109142 Hnrnph1-005 protein_coding Mus_musculus 0 257
ENSMUST00000118898 Hnrnph3-002 protein_coding Mus_musculus 0 270
ENSMUST00000123371 Hnrnph1-008 processed_transcript Mus_musculus 0 193
ENSMUST00000126737 Hnrnph1-007 processed_transcript Mus_musculus 0 193
ENSMUST00000127964 Hnrnph1-010 processed_transcript Mus_musculus 0 254
ENSMUST00000133435 Hnrnph1-013 processed_transcript Mus_musculus 0 231
ENSMUST00000134230 Hnrnph1-009 processed_transcript Mus_musculus 0 254
ENST00000265866 HNRNPH3-012 protein_coding Homo_sapiens 0 270
ENST00000316594 HNRNPH2-001 protein_coding Homo_sapiens 0 200
ENST00000329433 HNRNPH1-009 protein_coding Homo_sapiens 0 246
ENST00000354695 HNRNPH3-003 protein_coding Homo_sapiens 0 270
ENST00000356731 HNRNPH1-001 protein_coding Homo_sapiens 0 246
ENST00000393432 HNRNPH1-006 protein_coding Homo_sapiens 0 246
ENST00000442819 HNRNPH1-005 protein_coding Homo_sapiens 0 246
ENST00000467249 HNRNPH3-001 processed_transcript Homo_sapiens 0 270
ENST00000469172 HNRNPH3-004 processed_transcript Homo_sapiens 0 231
ENST00000481819 HNRNPH3-006 processed_transcript Homo_sapiens 0 231
ENST00000486854 HNRNPH3-009 processed_transcript Homo_sapiens 0 270
ENST00000491200 HNRNPH3-005 processed_transcript Homo_sapiens 0 239
ENST00000504348 HNRNPH1-021 protein_coding Homo_sapiens 5.04467e-44 182
ENST00000505811 HNRNPH1-015 protein_coding Homo_sapiens 0 246
ENST00000510411 HNRNPH1-008 protein_coding Homo_sapiens 0 246
ENST00000513225 HNRNPH1-013 protein_coding Homo_sapiens 2e-38 163
ENST00000514332 HNRNPH1-003 retained_intron Homo_sapiens 0 246
ENST00000515481 HNRNPH1-010 retained_intron Homo_sapiens 0 193
ENST00000515565 HNRNPH1P3-001 processed_pseudogene Homo_sapiens 0 215
ENST00000519056 HNRNPH1-045 protein_coding Homo_sapiens 0 246
ENST00000520415 HNRNPH1-036 retained_intron Homo_sapiens 0 211
ENST00000521173 HNRNPH1-049 protein_coding Homo_sapiens 3e-32 143
ENST00000521790 HNRNPH1-040 protein_coding Homo_sapiens 0 217
ENST00000522958 HNRNPH1-037 retained_intron Homo_sapiens 0 228
ENST00000523137 HNRNPH1-046 protein_coding Homo_sapiens 0 211

Loading