C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000112553 rims1a-201 ENSDARG00000074680 7955 - 13:27856518-27990868 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112553
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112553 15.370±0.00 0.616±0.43 0.240±0.08 0.077±0.00 0.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053Q CIL_00053Q_0001 CGP 13:27597496-27991220

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0017137 IEA Rab GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081544 Rims1-201 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000097809 Rims1-202 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000097810 Rims1-203 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000097811 Rims1-204 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000115273 Rims1-205 protein_coding Mus_musculus 0.000000004 69
ENST00000264839 RIMS1-003 protein_coding Homo_sapiens 0.00000000000001 88

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