C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 10, type 2 (T2-cadherin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000078232 cdh10-001 ENSDARG00000055843 7955 + 2:28604768-28649116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078232
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078232 2.571±0.57 0.017±0.00 0.039±0.00 0.014±0.00 0.195±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0001 CGP 2:28216925-28649116

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 ISS integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264463 CDH10-001 protein_coding Homo_sapiens 2e-29 135
ENST00000510477 CDH10-002 nonsense_mediated_decay Homo_sapiens 2e-29 135

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