C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta 1 class VI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000075040 tubb1-001 ENSDARG00000053066 7955 + 6:49833530-49840084 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000075040
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000075040 0.325±0.28 3.952±1.28 1.256±0.96 0.027±0.00 0.217±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000695 CIL_000695_0001 CGP 6:49833530-49853806

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117711 Gm11892-001 processed_pseudogene Mus_musculus 0 261
ENST00000248151 TUBBP1-001 transcribed_processed_pseudogene Homo_sapiens 0 614
ENST00000327892 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000330914 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000383564 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000396384 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000396389 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000400530 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000400531 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000400534 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000412136 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000413547 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000416519 TUBBP6-001 processed_pseudogene Homo_sapiens 0 412
ENST00000419551 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000419792 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000420400 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000420618 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000421473 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000422650 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000422674 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000424734 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000425102 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000425136 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000426754 TUBB-003 protein_coding Homo_sapiens 0 676
ENST00000427480 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000432462 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000435546 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000436335 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000436628 TUBB-001 protein_coding Homo_sapiens 0 697
ENST00000437490 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000444441 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000446385 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000453350 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000454454 TUBB-002 protein_coding Homo_sapiens 0 678
ENST00000454620 TUBB-004 protein_coding Homo_sapiens 0 680
ENST00000518096 TUBBP1-002 processed_transcript Homo_sapiens 0 614

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