C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tolloid-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000054472 tll1-001 ENSDARG00000037429 7955 - 1:19514406-19607327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000054472
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000054472 0.488±0.01 0.851±0.61 0.809±0.33 0.106±0.00 0.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PY CIL_0001PY_0001 CGP 1:19514406-19692601

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0001707 IMP mesoderm formation
GO:0001885 IMP endothelial cell development
GO:0004222 IEA metalloendopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005576 NAS extracellular region
GO:0006508 IEA proteolysis
GO:0007275 IEA multicellular organismal development
GO:0008233 IDA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0009953 IMP dorsal/ventral pattern formation
GO:0016787 IEA hydrolase activity
GO:0030513 IMP positive regulation of BMP signaling pathway
GO:0035124 IMP embryonic caudal fin morphogenesis
GO:0035162 IMP embryonic hemopoiesis
GO:0036342 IGI post-anal tail morphogenesis
GO:0046872 IEA metal ion binding
GO:0048264 IMP determination of ventral identity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022693 Bmp1-201 protein_coding Mus_musculus 0 1018
ENST00000306349 BMP1-010 protein_coding Homo_sapiens 0 701
ENST00000306385 BMP1-001 protein_coding Homo_sapiens 0 929
ENST00000354870 BMP1-201 protein_coding Homo_sapiens 0 750
ENST00000471755 BMP1-003 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000483364 BMP1-002 nonsense_mediated_decay Homo_sapiens 0 521
ENST00000518913 BMP1-015 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000520626 BMP1-006 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000520970 BMP1-009 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000520982 BMP1-005 nonsense_mediated_decay Homo_sapiens 0 850
ENST00000521385 BMP1-007 nonsense_mediated_decay Homo_sapiens 0 697

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