C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000053304 ENSDARG00000036700 7955 - 6:6906269-6909861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000053304
Transcript ID Brain Heart Liver Muscle
ENSDART00000053304 8.912±8.79 16.418±13.81 3.185±0.00 8.327±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295766 TUBA1A-002 protein_coding Homo_sapiens 0 1269
ENST00000301071 TUBA1A-001 protein_coding Homo_sapiens 0 1269
ENST00000301072 TUBA1C-001 protein_coding Homo_sapiens 0 1258
ENST00000316027 TUBA8-002 protein_coding Homo_sapiens 0 937
ENST00000330423 TUBA8-001 protein_coding Homo_sapiens 0 941
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 1315
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 1319
ENST00000410028 TUBA3GP-001 unprocessed_pseudogene Homo_sapiens 0 778
ENST00000416740 TUBA8-003 protein_coding Homo_sapiens 0 937
ENST00000474897 PEX26-004 nonsense_mediated_decay Homo_sapiens 0 939
ENST00000530835 TUBAP2-001 processed_pseudogene Homo_sapiens 0 1127
ENST00000541364 TUBA1C-002 protein_coding Homo_sapiens 0 1254
ENST00000546918 TUBA1A-011 protein_coding Homo_sapiens 0 490
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 1315
ENST00000547939 TUBA1A-009 protein_coding Homo_sapiens 0 688
ENST00000548470 TUBA1C-007 retained_intron Homo_sapiens 0 1046
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 326
ENST00000550767 TUBA1A-006 protein_coding Homo_sapiens 0 1266
ENST00000552448 TUBA1C-003 nonsense_mediated_decay Homo_sapiens 0 1256

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