C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SLIT-ROBO Rho GTPase activating protein 2b | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000048707  |
srgap2b-201 |
ENSDARG00000045789 |
7955 | + |
4:8351789-8405486  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002KR | CIL_0002KR_0001 | CGP | 4:8351360-8422161 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0007165 | IEA | signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000020322
|
Srgap1-001 | protein_coding | Mus_musculus | 0 | 806 |
|
ENSMUST00000081688
|
Srgap1-201 | protein_coding | Mus_musculus | 0 | 278 |
|
ENSMUST00000161996
|
Srgap1-003 | processed_transcript | Mus_musculus | 0 | 195 |
|
ENST00000612199
|
SRGAP2B-001 | protein_coding | Homo_sapiens | 1e-39 | 171 |
|
ENST00000619678
|
SRGAP2B-201 | protein_coding | Homo_sapiens | 3e-40 | 171 |
|
ENST00000621582
|
SRGAP2B-005 | nonsense_mediated_decay | Homo_sapiens | 1e-23 | 113 |
