| Transcript ID | Brain | Heart | Kidney | Muscle |
|---|---|---|---|---|
| ENSDART00000031546 | 5.930±0.00 | 0.055±0.00 | 0.243±0.00 | 0.237±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | cholinergic receptor, nicotinic, alpha 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000031546  |
chrna6-001 |
ENSDARG00000055559 |
7955 | - |
1:21258659-21286157  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004889 | IEA | acetylcholine-activated cation-selective channel activity |
| GO:0005216 | IEA | ion channel activity |
| GO:0005230 | IEA | extracellular ligand-gated ion channel activity |
| GO:0005886 | IEA | plasma membrane |
| GO:0006810 | IEA | transport |
| GO:0006811 | IEA | ion transport |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral to membrane |
| GO:0030054 | IEA | cell junction |
| GO:0045202 | IEA | synapse |
| GO:0045211 | IEA | postsynaptic membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000033882
|
Chrna6-201 | protein_coding | Mus_musculus | 0 | 420 |
|
ENSMUST00000034851
|
Chrna3-201 | protein_coding | Mus_musculus | 1e-26 | 126 |
|
ENST00000326828
|
CHRNA3-001 | protein_coding | Homo_sapiens | 1e-17 | 97 |
|
ENST00000559002
|
CHRNA3-004 | processed_transcript | Homo_sapiens | 0.000000003 | 66 |
|
ENST00000559658
|
CHRNA3-003 | nonsense_mediated_decay | Homo_sapiens | 6e-18 | 97 |
