C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet derived growth factor receptor beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000028255 pdgfrb-201 ENSDARG00000057345 7955 + 14:3463494-3495433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000028255
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000028255 3.692±1.14 1.999±0.26 1.954±0.00 0.191±0.00 4.497±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079E CIL_00079E_0001 CGP 14:3399769-3495433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IMP angiogenesis
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0004714 IEA transmembrane receptor protein tyrosine kinase activity
GO:0005018 IEA platelet-derived growth factor alpha-receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007169 IEA transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016740 IEA transferase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0048008 IEA platelet-derived growth factor receptor signaling pathway
GO:0048514 IMP blood vessel morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 8.99998e-41 174
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 8.99998e-41 174
ENST00000257290 PDGFRA-001 protein_coding Homo_sapiens 2.8026e-45 189
ENST00000507166 FIP1L1-005 protein_coding Homo_sapiens 1.4013e-45 189

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