C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000016360 ENSDARG00000094466 7955 - 9:7719653-7725518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016360
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016360 2.023±0.41 2.198±1.15 0.189±0.00 0.013±0.00 1.883±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032233 Tuba8-001 protein_coding Mus_musculus 0 974
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 0 1105
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 0 1107
ENSMUST00000187103 Tuba4a-005 retained_intron Mus_musculus 5e-35 152
ENSMUST00000188593 Tuba4a-003 protein_coding Mus_musculus 0 869
ENST00000248437 TUBA4A-001 protein_coding Homo_sapiens 0 1190
ENST00000392088 TUBA4A-002 protein_coding Homo_sapiens 0 1194
ENST00000398989 TUBA4A-011 protein_coding Homo_sapiens 0 556
ENST00000400113 TUBA3C-002 protein_coding Homo_sapiens 0 1027
ENST00000410028 TUBA3GP-001 unprocessed_pseudogene Homo_sapiens 0 614
ENST00000442868 RP11-480I12.5-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 464
ENST00000472881 RP11-959F10.5-001 processed_pseudogene Homo_sapiens 0 632
ENST00000486997 TUBA4B-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 933
ENST00000490341 TUBA4B-001 processed_transcript Homo_sapiens 0 822
ENST00000498660 TUBA4A-006 processed_transcript Homo_sapiens 0 745
ENST00000618094 TUBA3C-201 protein_coding Homo_sapiens 0.0000001 62

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