C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000008854 wsb1-001 ENSDARG00000021343 7955 - 15:30459335-30474876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008854
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008854 16.894±3.44 11.862±8.24 22.721±0.00 2.565±0.00 19.464±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PL CIL_0007PL_0005 UCNEbase 15:30091498-30537230
CIL_0001AY CIL_0001AY_0001 CGP 15:30368155-30474876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017821 Wsb1-001 protein_coding Mus_musculus 0 394
ENSMUST00000131818 Wsb1-003 nonsense_mediated_decay Mus_musculus 0 226
ENSMUST00000131848 Wsb1-002 nonsense_mediated_decay Mus_musculus 0 193
ENSMUST00000137890 Wsb1-004 retained_intron Mus_musculus 0 226

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