C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired box 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000009709 PAX7 9606 + 1:18631006-18748866 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375375 PAX7-001 18631006-18736138 protein_coding
  ENST00000400661 PAX7-003 18631524-18736102 protein_coding
  ENST00000420770 PAX7-002 18631521-18748866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLungMuscleOvaryTestisENST00000400661ENST00000420770
Transcript ID Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000400661 N/A N/A N/A N/A N/A 1.483±0.00 N/A N/A
ENST00000420770 0.201±0.17 0.037±0.00 0.009±0.00 0.006±0.00 0.012±0.00 0.382±0.11 0.009±0.01 0.149±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Z CIL_00098Z_0001 VISTA 1:18089892-18691429
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000983 IEA RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006338 IEA chromatin remodeling
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007519 IEA skeletal muscle tissue development
GO:0009653 TAS anatomical structure morphogenesis
GO:0010453 IEA regulation of cell fate commitment
GO:0010468 IEA regulation of gene expression
GO:0014813 IEA skeletal muscle satellite cell commitment
GO:0021527 IEA spinal cord association neuron differentiation
GO:0021904 IEA dorsal/ventral neural tube patterning
GO:0031062 IEA positive regulation of histone methylation
GO:0043066 TAS negative regulation of apoptotic process
GO:0043393 IEA regulation of protein binding
GO:0043403 IEA skeletal muscle tissue regeneration
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048663 IEA neuron fate commitment
GO:0048706 IEA embryonic skeletal system development
GO:0051216 IEA cartilage development
GO:0060415 IEA muscle tissue morphogenesis
GO:2000288 IEA positive regulation of myoblast proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005173 pax7a paired box gene 7a protein_coding Danio_rerio
ENSDARG00000070818 pax7b paired box gene 7b protein_coding Danio_rerio
ENSDARG00000091353 PAX7 (3 of 3) paired box 7 protein_coding Danio_rerio
ENSMUSG00000028736 Pax7 paired box 7 protein_coding Mus_musculus

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