C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catenin (cadherin-associated protein), alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077846 ctnna1 7955 - 24:35832742-36171912 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052441 ctnna1-001 35832742-36025382 protein_coding
  ENSDART00000138627 ctnna1-002 36050838-36171912 protein_coding
  ENSDART00000140050 ctnna1-201 36050849-36169038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052441ENSDART00000138627ENSDART00000140050
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052441 1.533±0.86 42.330±23.15 18.542±12.84 2.307±0.00 2.805±0.00
ENSDART00000138627 N/A 1.801±0.00 1.030±0.00 N/A N/A
ENSDART00000140050 0.179±0.00 0.565±0.00 N/A 0.135±0.00 0.026±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062R CIL_00062R_0001 CGP 24:35832742-36171912

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005902 IDA microvillus
GO:0005913 IDA cell-cell adherens junction
GO:0005938 IDA cell cortex
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton
GO:0016342 IDA catenin complex
GO:0045296 IEA cadherin binding
GO:0051015 IDA actin filament binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000044115 CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa protein_coding Homo_sapiens
ENSMUSG00000037815 Ctnna1 catenin (cadherin associated protein), alpha 1 protein_coding Mus_musculus

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