C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603116 RP4-741O10.1-001 ENSG00000270916 9606 - X:151023607-151023722 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0001 VISTA X:150939220-151540580
CIL_0001AV CIL_0001AV_0001 CGP X:150980509-151181465

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 1e-33 145
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 3e-33 143
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 4e-32 139
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 4e-32 139
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 4e-32 139
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 4e-32 139
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 4e-32 139
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 4e-32 139
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 2e-31 137
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 2e-31 137
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 2e-30 134
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 2e-30 134
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 1e-28 128
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 1e-28 128
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 3e-24 113

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