C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583775 PRKCA-004 ENSG00000154229 9606 + 17:66302957-66306348 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AL CIL_0003AL_0003 CGP 17:66302636-66885486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134725 Prkca-002 processed_transcript Mus_musculus 3.99931e-42 174
ENSMUST00000059595 Prkca-001 protein_coding Mus_musculus 3.99931e-42 174
ENSDART00000137211 prkcba-002 protein_coding Danio_rerio 9e-34 147
ENSDART00000006211 prkcba-001 protein_coding Danio_rerio 9e-34 147
ENSMUST00000064921 Prkcb-003 protein_coding Mus_musculus 1e-31 139
ENSMUST00000064989 Prkcb-001 protein_coding Mus_musculus 1e-31 139
ENSMUST00000143692 Prkcb-002 nonsense_mediated_decay Mus_musculus 1e-31 139
ENSDART00000142610 prkcg-001 protein_coding Danio_rerio 2e-20 102
ENSMUST00000133383 Apoh-002 protein_coding Mus_musculus 0.0000004 58

Loading