C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000540557  |
RP11-613M10.9-001 |
ENSG00000255872 |
9606 | - |
9:37588413-38068687  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00080S | CIL_00080S_0001 | VISTA | 9:37036633-37638309 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000061986
|
Shb-001 | protein_coding | Mus_musculus | 0 | 939 |
|
ENSMUST00000147926
|
Shb-002 | processed_transcript | Mus_musculus | 0 | 590 |
|
ENSMUST00000130107
|
Shb-004 | processed_transcript | Mus_musculus | 0 | 547 |
|
ENSMUST00000152056
|
Exosc3-004 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000130843
|
Exosc3-002 | processed_transcript | Mus_musculus | 0 | 219 |
|
ENSMUST00000143111
|
Exosc3-003 | processed_transcript | Mus_musculus | 0 | 219 |
|
ENSMUST00000030003
|
Exosc3-001 | protein_coding | Mus_musculus | 0 | 219 |
|
ENSMUST00000173269
|
Neu1-002 | retained_intron | Mus_musculus | 0.000004 | 58 |
|
ENSMUST00000034431
|
Tmem170-201 | protein_coding | Mus_musculus | 0.000004 | 58 |
