C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439897 RP11-91I11.1-001 ENSG00000229067 9606 + 1:91600171-91600321 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069I CIL_00069I_0001 CGP 1:91500893-91906335
CIL_0008DI CIL_0008DI_0001 VISTA 1:91505983-92108430
CIL_0008YV CIL_0008YV_0001 VISTA 1:91545179-92146674

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115231 Rpl39-001 protein_coding Mus_musculus 4.06377e-44 180
ENSMUST00000142604 Rpl39-ps-002 processed_transcript Mus_musculus 1.99965e-42 174
ENSMUST00000117602 Gm15148-001 processed_pseudogene Mus_musculus 1.99965e-42 174
ENSMUST00000146505 Rpl39-ps-001 transcribed_processed_pseudogene Mus_musculus 6.00036e-42 172
ENSMUST00000191066 RP23-127L14.1-001 processed_pseudogene Mus_musculus 6.00036e-42 172
ENSMUST00000121292 Rpl39l-002 protein_coding Mus_musculus 8.00001e-41 169
ENSMUST00000044103 Rpl39l-001 protein_coding Mus_musculus 8.00001e-41 169
ENSMUST00000121971 Gm12013-001 processed_pseudogene Mus_musculus 3e-40 167
ENSMUST00000121969 Gm11334-001 processed_pseudogene Mus_musculus 2e-37 158
ENSMUST00000118985 Gm14541-001 processed_pseudogene Mus_musculus 8e-36 152
ENSMUST00000119534 Gm15067-001 processed_pseudogene Mus_musculus 4e-34 147
ENSMUST00000118637 Gm11694-001 processed_pseudogene Mus_musculus 2e-31 137
ENSMUST00000138799 Rpl39-002 retained_intron Mus_musculus 2e-31 137

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