C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000422269  |
RP11-761B3.1-001 |
ENSG00000273269 |
9606 | - |
2:47065941-47176511  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008D2 | CIL_0008D2_0001 | VISTA | 2:46768636-47372293 |
| CIL_0003T5 | CIL_0003T5_0002 | CGP | 2:46901870-47076137 |
| CIL_0003T6 | CIL_0003T6_0002 | CGP | 2:46916157-47155378 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000040440
|
Calm2-001 | protein_coding | Mus_musculus | 6e-35 | 152 |
|
ENSMUST00000150137
|
Calm2-002 | retained_intron | Mus_musculus | 8e-29 | 132 |
|
ENSMUST00000143965
|
Calm2-003 | retained_intron | Mus_musculus | 3e-28 | 130 |
|
ENSMUST00000118521
|
Gm14480-001 | processed_pseudogene | Mus_musculus | 0.000000008 | 66 |
