C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: runt-related transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416754 RUNX1-004 ENSG00000159216 9606 - 21:34892925-35049270 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZS CIL_0008ZS_0001 VISTA 21:34243666-34847364
CIL_00094R CIL_00094R_0001 VISTA 21:34258399-34859715
CIL_00078F CIL_00078F_0001 CGP 21:34669389-36004667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000975 IDA regulatory region DNA binding
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008134 IDA transcription factor binding
GO:0030097 TAS hemopoiesis
GO:0030099 IDA myeloid cell differentiation
GO:0030853 IMP negative regulation of granulocyte differentiation
GO:0030854 IMP positive regulation of granulocyte differentiation
GO:0042803 IDA protein homodimerization activity
GO:0045766 ISS positive regulation of angiogenesis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IDA protein heterodimerization activity
GO:0048935 TAS peripheral nervous system neuron development
GO:0071425 TAS hematopoietic stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189679 Runx1-006 protein_coding Mus_musculus 1e-37 159
ENSMUST00000023673 Runx1-001 protein_coding Mus_musculus 1e-37 159

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