C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB6A, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400470 RAB6A-010 ENSG00000175582 9606 - 11:73704164-73760610 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JC CIL_0003JC_0002 CGP 11:73646178-73761137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032946 Rab6a-001 protein_coding Mus_musculus 0 774
ENSMUST00000118877 Gm13082-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000098252 Rab6a-002 protein_coding Mus_musculus 0 625
ENSMUST00000107048 Rab6a-003 protein_coding Mus_musculus 0 553
ENSMUST00000123960 Rab6a-004 retained_intron Mus_musculus 1e-39 167
ENSMUST00000146003 Mrpl48-003 processed_transcript Mus_musculus 0.00000000003 73

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