C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: p53-induced death domain protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347755 PIDD1-001 ENSG00000177595 9606 - 11:799184-805245 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EP CIL_0003EP_0001 CGP 11:799179-812880

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005123 TAS death receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IMP nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006915 IEA apoptotic process
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006974 IDA:IEA cellular response to DNA damage stimulus
GO:0006977 IMP DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007165 TAS:IEA signal transduction
GO:0043065 TAS positive regulation of apoptotic process
GO:0043066 IMP negative regulation of apoptotic process
GO:0051092 TAS positive regulation of NF-kappaB transcription factor activity
GO:1902043 IEA positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001235 IEA positive regulation of apoptotic signaling pathway
GO:2001238 IEA positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106005 Pidd1-201 protein_coding Mus_musculus 0 2281
ENSMUST00000026580 Pidd1-001 protein_coding Mus_musculus 0 2281
ENSMUST00000190882 Pidd1-010 nonsense_mediated_decay Mus_musculus 0 1823
ENSMUST00000131980 Pidd1-003 retained_intron Mus_musculus 0 1823
ENSMUST00000190068 Pidd1-002 nonsense_mediated_decay Mus_musculus 0 1777
ENSMUST00000154949 Pidd1-009 retained_intron Mus_musculus 0 1406
ENSMUST00000138065 Pidd1-006 retained_intron Mus_musculus 0 1142
ENSMUST00000147268 Pidd1-005 retained_intron Mus_musculus 0 645
ENSMUST00000128703 Pidd1-004 nonsense_mediated_decay Mus_musculus 0 383

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