C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD9 homolog A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181329 RAD9A-201 ENSMUSG00000097909 10090 - MG153_PATCH:4195197-4201602 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000738 IEA DNA catabolic process, exonucleolytic
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006281 IEA DNA repair
GO:0008853 IEA exodeoxyribonuclease III activity
GO:0030896 IEA checkpoint clamp complex
GO:0031573 IGI intra-S DNA damage checkpoint
GO:1902231 IGI positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307980 RAD9A-001 protein_coding Homo_sapiens 0 1166
ENST00000312989 PPP1CA-002 protein_coding Homo_sapiens 0 211
ENST00000376745 PPP1CA-001 protein_coding Homo_sapiens 1.99965e-42 178
ENST00000526510 PPP1CA-003 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000529100 RAD9A-003 processed_transcript Homo_sapiens 0 717
ENST00000530934 RAD9A-002 retained_intron Homo_sapiens 0 429
ENST00000532446 PPP1CA-004 processed_transcript Homo_sapiens 1.00053e-42 178
ENST00000535644 RAD9A-009 processed_transcript Homo_sapiens 0 660
ENST00000538013 RAD9A-004 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000541132 RAD9A-008 retained_intron Homo_sapiens 0 455
ENST00000542139 RAD9A-006 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000543808 RAD9A-005 processed_transcript Homo_sapiens 0 688
ENST00000544620 RAD9A-007 protein_coding Homo_sapiens 0 492

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