C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific methyltransferase 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173174 Kmt2c-003 ENSMUSG00000038056 10090 - 5:25372836-25498755 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_00027A CIL_00027A_0002 CGP 5:25222882-25498783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 ISO nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0035097 ISO histone methyltransferase complex
GO:0042800 ISO histone methyltransferase activity (H3-K4 specific)
GO:0051568 ISO histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262189 KMT2C-001 protein_coding Homo_sapiens 0 2793
ENST00000355193 KMT2C-201 protein_coding Homo_sapiens 0 2793
ENST00000452749 KMT2C-013 protein_coding Homo_sapiens 0 680
ENST00000470054 BAGE2-001 processed_transcript Homo_sapiens 0 616
ENST00000490130 KMT2C-003 retained_intron Homo_sapiens 0 313
ENST00000496773 BAGE2-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 616
ENST00000558084 KMT2C-018 nonsense_mediated_decay Homo_sapiens 0 2793

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