C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sodium channel, voltage-gated, type I, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000129508  |
Scn1a-002 |
ENSMUSG00000064329 |
10090 | - |
2:66348364-66440814  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00087V | CIL_00087V_0002 | VISTA | 2:65692128-66294633 |
| CIL_0006CL | CIL_0006CL_0002 | CGP | 2:66184327-66440840 |
| CIL_0006CK | CIL_0006CK_0002 | CGP | 2:66270781-66634962 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000283254
|
SCN3A-001 | protein_coding | Homo_sapiens | 0 | 272 |
|
ENST00000283256
|
SCN2A-001 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000303395
|
SCN1A-001 | protein_coding | Homo_sapiens | 0 | 414 |
|
ENST00000360093
|
SCN3A-201 | protein_coding | Homo_sapiens | 0 | 272 |
|
ENST00000375405
|
SCN1A-002 | protein_coding | Homo_sapiens | 0 | 448 |
|
ENST00000375427
|
SCN2A-002 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000375437
|
SCN2A-201 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000409050
|
SCN1A-003 | protein_coding | Homo_sapiens | 0 | 414 |
|
ENST00000409101
|
SCN3A-002 | protein_coding | Homo_sapiens | 0 | 272 |
|
ENST00000423058
|
SCN1A-201 | protein_coding | Homo_sapiens | 0 | 473 |
|
ENST00000424833
|
SCN2A-003 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000440431
|
SCN3A-004 | protein_coding | Homo_sapiens | 0 | 272 |
|
ENST00000453007
|
SCN3A-003 | protein_coding | Homo_sapiens | 0 | 272 |
|
ENST00000480032
|
SCN2A-005 | retained_intron | Homo_sapiens | 0 | 309 |
|
ENST00000507401
|
SCN1A-007 | retained_intron | Homo_sapiens | 0 | 499 |
