C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075178 Rpl18-001 ENSMUSG00000059070 10090 + 7:45715457-45720834 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0022625 IEA cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000084795 RPL18-006 protein_coding Homo_sapiens 0 710
ENST00000422478 RP11-709P2.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000478088 RPL18P13-001 processed_pseudogene Homo_sapiens 0 601
ENST00000486306 RP11-313M3.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000497218 RP11-286B5.1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000547892 RPL18-003 retained_intron Homo_sapiens 2e-24 119
ENST00000547897 RPL18-010 non_stop_decay Homo_sapiens 0 407
ENST00000549273 RPL18-014 protein_coding Homo_sapiens 0 649
ENST00000549370 RPL18-009 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000549920 RPL18-001 protein_coding Homo_sapiens 0 797
ENST00000550645 RPL18-012 protein_coding Homo_sapiens 0 399
ENST00000550671 RPL18-007 retained_intron Homo_sapiens 5.60519e-45 185
ENST00000550973 RPL18-013 protein_coding Homo_sapiens 0 654
ENST00000551749 RPL18-004 retained_intron Homo_sapiens 0 313
ENST00000552347 RPL18-005 retained_intron Homo_sapiens 0 287
ENST00000552588 RPL18-008 protein_coding Homo_sapiens 0.0000000003 69
ENST00000552705 RPL18-002 retained_intron Homo_sapiens 0 429

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