Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_00083V_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
hs1578	VISTA	9606	2:211090115-211692433
Gene	Transcript	Position	Biotype
ENSG00000178568 (ERBB4) v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4	ENST00000260943 (ERBB4-004)	211619253-212538529	protein_coding
	ENST00000342788 (ERBB4-001)	211375717-212538841	protein_coding
	ENST00000402597 (ERBB4-201)	211375717-212124915	protein_coding
	ENST00000435846 (ERBB4-005)	211750699-212429247	protein_coding
	ENST00000436443 (ERBB4-002)	211375721-212538841	protein_coding
	ENST00000459774 (ERBB4-007)	212124584-212125181	retained_intron
	ENST00000463121 (ERBB4-008)	211657597-211665354	processed_transcript
	ENST00000484474 (ERBB4-006)	211725152-211960762	processed_transcript
	ENST00000484594 (ERBB4-003)	211561762-212538582	retained_intron
ENSG00000231017 (AC013404.1)	ENST00000413068 (AC013404.1-001)	211298941-211299189	processed_pseudogene

CIL_00083V_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
hs1578	VISTA	10090	1:67745929-68348127
Gene	Transcript	Position	Biotype
ENSMUSG00000062209 (Erbb4) v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	ENSMUST00000119142 (Erbb4-002)	68032186-69107756	protein_coding
	ENSMUST00000121473 (Erbb4-001)	68032186-69108059	protein_coding
	ENSMUST00000126682 (Erbb4-003)	68298150-68330216	retained_intron
	ENSMUST00000131148 (Erbb4-005)	68290155-68298318	processed_transcript
	ENSMUST00000153432 (Erbb4-004)	68250655-69107756	protein_coding
ENSMUSG00000083795 (Gm15670) predicted gene 15670	ENSMUST00000117740 (Gm15670-001)	68293280-68293726	processed_pseudogene
ENSMUSG00000085075 (Gm15669) predicted gene 15669	ENSMUST00000147834 (Gm15669-001)	67792481-67805324	lincRNA
ENSMUSG00000087329 (Gm15671) predicted gene 15671	ENSMUST00000124160 (Gm15671-001)	68024243-68025763	lincRNA
ENSMUSG00000096031 (Gm23189) predicted gene, 23189	ENSMUST00000178954 (Gm23189-201)	67973676-67973777	miRNA

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000178568

ENST00000260943

N/A

0.378±0.00

N/A

1.395±0.00

N/A

0.029±0.02

N/A

ENST00000342788

N/A

1.749±0.00

0.796±0.00

N/A

0.220±0.00

0.089±0.00

N/A

0.677±0.29

ENST00000402597

N/A

0.062±0.00

N/A

1.396±0.00

0.331±0.07

0.052±0.03

N/A

0.352±0.34

0.002±0.00

0.205±0.00

0.314±0.00

0.084±0.00

0.014±0.01

0.256±0.08

ENST00000435846

N/A

ENST00000436443

N/A

1.945±0.00

N/A

0.180±0.00

2.074±0.00

0.001±0.00

N/A

0.522±0.00

0.429±0.00

N/A

0.529±0.35

ENST00000459774

N/A

0.099±0.00

N/A

ENST00000463121

N/A

ENST00000484474

N/A

ENST00000484594

N/A

2.668±0.00

N/A

0.516±0.00

0.121±0.00

N/A

0.554±0.00

N/A

0.203±0.00

N/A

ENSG00000231017

ENST00000413068

N/A

0.071±0.00

N/A

0.062±0.00

0.061±0.00

N/A

0.122±0.00

0.116±0.00

0.840±0.00

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000062209

ENSMUST00000119142

0.016±0.00

0.074±0.00

N/A

0.706±0.28

0.184±0.00

0.011±0.00

0.397±0.13

0.334±0.16

0.051±0.06

0.086±0.02

0.025±0.01

0.038±0.01

0.003±0.00

0.071±0.03

ENSMUST00000121473

0.029±0.00

0.079±0.03

0.029±0.00

1.756±0.39

0.135±0.06

N/A

0.211±0.00

0.937±0.30

0.126±0.08

0.084±0.03

N/A

0.094±0.05

0.000±0.00

0.055±0.00

ENSMUST00000126682

N/A

0.253±0.00

N/A

ENSMUST00000131148

N/A

ENSMUST00000153432

0.020±0.00

N/A

0.818±0.00

N/A

0.107±0.09

0.119±0.03

0.029±0.00

N/A

0.091±0.02

ENSMUSG00000083795

ENSMUST00000117740

N/A

0.137±0.01

N/A

ENSMUSG00000085075

ENSMUST00000147834

N/A

1.570±0.70

ENSMUSG00000087329

ENSMUST00000124160

N/A

0.017±0.00

N/A

0.065±0.00

N/A

ENSMUSG00000096031

ENSMUST00000178954

N/A

1475.705±151.80

819.860±77.18

N/A

346.110±185.61

N/A

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

Loading