Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_0005I7_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000203747-ENSG00000072694	CGP	9606	1:161541759-161678654
Gene	Transcript	Position	Biotype
ENSG00000072694 (FCGR2B) Fc fragment of IgG, low affinity IIb, receptor (CD32)	ENST00000236937 (FCGR2B-005)	161663147-161678022	protein_coding
	ENST00000358671 (FCGR2B-002)	161663161-161678654	protein_coding
	ENST00000367960 (FCGR2B-201)	161581311-161678650	protein_coding
	ENST00000367961 (FCGR2B-001)	161663161-161678032	protein_coding
	ENST00000403078 (FCGR2B-202)	161581311-161678650	protein_coding
	ENST00000428605 (FCGR2B-203)	161663224-161677569	protein_coding
	ENST00000480308 (FCGR2B-003)	161663192-161678053	retained_intron
	ENST00000485778 (FCGR2B-004)	161663199-161674116	retained_intron
ENSG00000162747 (FCGR3B) Fc fragment of IgG, low affinity IIIb, receptor (CD16b)	ENST00000294800 (FCGR3B-201)	161623200-161631462	protein_coding
	ENST00000367964 (FCGR3B-003)	161623196-161631963	protein_coding
	ENST00000421702 (FCGR3B-002)	161624223-161631158	protein_coding
	ENST00000531221 (FCGR3B-001)	161623990-161631206	protein_coding
	ENST00000533780 (FCGR3B-006)	161626307-161630250	retained_intron
	ENST00000534489 (FCGR3B-004)	161629890-161631126	retained_intron
	ENST00000534776 (FCGR3B-005)	161626357-161631032	protein_coding
	ENST00000613418 (FCGR3B-202)	161623200-161631047	protein_coding
	ENST00000614870 (FCGR3B-203)	161623200-161631047	protein_coding
ENSG00000203747 (FCGR3A) Fc fragment of IgG, low affinity IIIa, receptor (CD16a)	ENST00000367967 (FCGR3A-003)	161541796-161550591	protein_coding
	ENST00000367969 (FCGR3A-001)	161541759-161550028	protein_coding
	ENST00000426740 (FCGR3A-005)	161541855-161549789	protein_coding
	ENST00000436743 (FCGR3A-201)	161541765-161550623	protein_coding
	ENST00000442336 (FCGR3A-004)	161548421-161550737	protein_coding
	ENST00000443193 (FCGR3A-202)	161541763-161550028	protein_coding
	ENST00000476031 (FCGR3A-002)	161545399-161549730	processed_transcript
ENSG00000224515 (RP11-5K23.5)	ENST00000419446 (RP11-5K23.5-001)	161556290-161557078	antisense
ENSG00000225217 (HSPA7) heat shock 70kDa protein 7 (HSP70B)	ENST00000445535 (HSPA7-001)	161606291-161608217	unprocessed_pseudogene

CIL_0005I7_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000059089-ENSMUSG00000059498	CGP	10090	1:171018920-171064935
Gene	Transcript	Position	Biotype
ENSMUSG00000059089 (Fcgr4) Fc receptor, IgG, low affinity IV	ENSMUST00000078825 (Fcgr4-001)	171018920-171029761	protein_coding
ENSMUSG00000059498 (Fcgr3) Fc receptor, IgG, low affinity III	ENSMUST00000164044 (Fcgr3-001)	171051175-171059403	protein_coding
	ENSMUST00000164179 (Fcgr3-004)	171057828-171064935	protein_coding
	ENSMUST00000168817 (Fcgr3-003)	171051174-171058054	retained_intron
	ENSMUST00000169017 (Fcgr3-002)	171051195-171059403	protein_coding
ENSMUSG00000065905 (Gm26110) predicted gene, 26110	ENSMUST00000083971 (Gm26110-201)	171027965-171028129	snRNA

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000072694

ENST00000236937

N/A

5.325±0.00

1.062±0.00

4.608±0.00

7.749±0.00

7.822±1.92

N/A

0.972±0.00

N/A

122.029±49.19

2.533±0.00

ENST00000358671

N/A

2.696±0.00

N/A

1.475±0.00

N/A

1.352±0.00

2.174±0.00

1.581±0.00

N/A

1.651±0.00

ENST00000367960

N/A

ENST00000367961

N/A

ENST00000403078

N/A

0.491±0.00

1.526±0.00

26.928±9.21

N/A

ENST00000428605

N/A

ENST00000480308

N/A

2.154±0.00

0.303±0.00

N/A

1.168±0.00

N/A

0.661±0.00

N/A

0.360±0.00

ENST00000485778

N/A

ENSG00000162747

ENST00000294800

N/A

0.025±0.00

0.169±0.00

0.190±0.00

N/A

1.131±0.00

N/A

0.131±0.00

N/A

ENST00000367964

2.852±0.00

0.073±0.00

N/A

0.649±0.29

1.345±0.00

0.105±0.00

0.259±0.00

0.115±0.00

27.093±0.00

0.368±0.00

0.452±0.40

5.384±0.67

0.539±0.39

ENST00000421702

N/A

0.084±0.02

N/A

0.568±0.00

0.500±0.24

0.786±0.00

3.752±0.00

0.174±0.00

0.650±0.00

N/A

ENST00000531221

N/A

0.026±0.00

0.105±0.00

N/A

0.109±0.00

2.439±0.00

N/A

ENST00000533780

N/A

0.565±0.00

N/A

0.187±0.00

N/A

0.130±0.00

0.236±0.00

0.757±0.00

N/A

ENST00000534489

N/A

0.296±0.00

N/A

ENST00000534776

N/A

0.250±0.00

N/A

ENST00000613418

N/A

0.217±0.00

N/A

0.169±0.00

N/A

ENST00000614870

0.769±0.00

N/A

0.030±0.01

0.109±0.00

0.032±0.00

0.056±0.00

N/A

0.157±0.00

N/A

1.353±0.00

ENSG00000203747

ENST00000367967

9.389±0.00

11.264±0.00

0.545±0.00

N/A

3.635±0.00

N/A

1.143±0.47

3.147±0.00

N/A

2.622±1.14

19.301±8.46

3.907±0.00

ENST00000367969

N/A

ENST00000426740

4.362±0.00

N/A

10.941±0.00

N/A

1.556±0.00

0.843±0.00

6.389±0.00

5.559±4.78

25.559±0.00

0.744±0.00

5.653±0.00

13.542±5.32

1.382±0.00

ENST00000436743

4.927±0.00

5.028±0.00

N/A

1.664±0.00

3.970±0.00

0.355±0.00

0.368±0.00

3.855±1.57

3.618±0.00

9.986±1.24

N/A

2.567±1.40

16.118±12.16

0.997±0.78

ENST00000442336

N/A

ENST00000443193

N/A

0.763±0.00

N/A

ENST00000476031

N/A

ENSG00000224515

ENST00000419446

0.032±0.00

0.065±0.00

N/A

0.030±0.00

ENSG00000225217

ENST00000445535

0.585±0.00

0.474±0.00

0.055±0.00

0.133±0.08

1.042±0.21

0.638±0.32

0.264±0.22

0.462±0.26

0.515±0.50

2.489±1.20

0.154±0.00

1.420±1.43

6.546±3.25

1.124±0.00

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000059089

ENSMUST00000078825

1.865±1.14

1.953±0.55

1.866±0.66

0.107±0.03

1.118±0.40

1.156±0.25

0.452±0.23

1.865±0.22

3.927±3.13

5.336±0.46

0.052±0.01

2.775±3.14

0.417±0.33

0.043±0.03

ENSMUSG00000059498

ENSMUST00000164044

13.509±2.08

4.432±0.75

10.720±0.13

1.432±0.59

17.401±7.56

4.620±0.59

3.476±0.27

1.811±0.33

9.302±8.12

10.275±0.96

1.167±0.32

6.062±2.82

8.025±9.62

10.807±8.57

ENSMUST00000164179

N/A

14.178±13.14

ENSMUST00000168817

N/A

6.206±0.70

0.248±0.00

ENSMUST00000169017

4.737±1.18

1.071±0.39

2.298±0.25

0.695±0.00

4.639±0.61

1.684±0.77

1.441±0.22

0.968±0.35

1.771±1.25

3.436±0.67

0.464±0.00

2.356±1.32

2.261±1.23

4.348±0.00

ENSMUSG00000065905

ENSMUST00000083971

N/A

0.540±0.00

N/A

0.130±0.00

N/A

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

Loading